IL_9QEG_121

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUG*UAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_121 not in the Motif Atlas

Geometric match to IL_8CRE_403

Geometric discrepancy: 0.2693

The information below is about IL_8CRE_403

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.1

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

23

Unit IDs

9QEG|1|Aa|G|664
9QEG|1|Aa|U|665
9QEG|1|Aa|G|666
*
9QEG|1|Aa|U|755
9QEG|1|Aa|A|756
9QEG|1|Aa|A|757
9QEG|1|Aa|C|758

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ah

Small ribosomal subunit protein uS8

Chain Ao

Small ribosomal subunit protein uS15