IL_9QEG_123
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QEG_123 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.1065
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9QEG|1|Aa|G|681
9QEG|1|Aa|G|682
9QEG|1|Aa|A|683
9QEG|1|Aa|A|684
9QEG|1|Aa|U|685
*
9QEG|1|Aa|G|721
9QEG|1|Aa|G|722
9QEG|1|Aa|A|723
9QEG|1|Aa|A|724
9QEG|1|Aa|C|725
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain Af
- Small ribosomal subunit protein bS6
- Chain Ak
- Small ribosomal subunit protein uS11
- Chain Ar
- Small ribosomal subunit protein bS18
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: