IL_9QIW_090
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CCAG*CG
- Length
- 6 nucleotides
- Bulged bases
- 9QIW|1|L5|C|3701
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QIW_090 not in the Motif Atlas
- Homologous match to IL_8CRE_089
- Geometric discrepancy: 0.476
- The information below is about IL_8CRE_089
- Detailed Annotation
- Minor groove platform, major groove intercalation
- Broad Annotation
- Minor groove platform, major groove intercalation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
9QIW|1|L5|C|3700
9QIW|1|L5|C|3701
9QIW|1|L5|A|3702
9QIW|1|L5|G|3703
*
9QIW|1|L5|C|3749
9QIW|1|L5|G|3750
Current chains
- Chain L5
- 28S rRNA
Nearby chains
No other chains within 10ÅColoring options: