IL_9QIW_093

3D structure

PDB id

9QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GAAUG*CGC

Length

8 nucleotides

Bulged bases

9QIW|1|L5|A|3711

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QIW_093 not in the Motif Atlas

Homologous match to IL_8CRE_092

Geometric discrepancy: 0.5467

The information below is about IL_8CRE_092

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90351.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

9QIW|1|L5|G|3710
9QIW|1|L5|A|3711
9QIW|1|L5|A|3712
9QIW|1|L5|U|3713
9QIW|1|L5|G|3714
*
9QIW|1|L5|C|3739
9QIW|1|L5|G|3740
9QIW|1|L5|C|3741

Current chains

Chain L5

28S rRNA

Nearby chains