IL_9QIW_097

3D structure

PDB id

9QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

UUG*CCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QIW_097 not in the Motif Atlas

Geometric match to IL_7QR8_004

Geometric discrepancy: 0.1979

The information below is about IL_7QR8_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

9QIW|1|L5|U|3914
9QIW|1|L5|U|3915
9QIW|1|L5|G|3916
*
9QIW|1|L5|C|4386
9QIW|1|L5|C|4387
9QIW|1|L5|A|4388

Current chains

Chain L5

28S rRNA

Nearby chains