IL_9QIW_111
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUG*CCAAG
- Length
- 8 nucleotides
- Bulged bases
- 9QIW|1|L5|A|4488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QIW_111 not in the Motif Atlas
- Geometric match to IL_3DD2_004
- Geometric discrepancy: 0.3948
- The information below is about IL_3DD2_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09353.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9QIW|1|L5|U|4468
9QIW|1|L5|U|4469
9QIW|1|L5|G|4470
*
9QIW|1|L5|C|4485
9QIW|1|L5|C|4486
9QIW|1|L5|A|4487
9QIW|1|L5|A|4488
9QIW|1|L5|G|4489
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CC
- Guanine nucleotide-binding protein-like 3
- Chain CD
- GTP-binding protein 4
- Chain CE
- Protein LLP homolog
- Chain CH
- Ribosome biogenesis protein NSA2 homolog
- Chain LH
- 60S ribosomal protein L9
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