IL_9QIW_122
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 9QIW|1|L5|A|4708
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QIW_122 not in the Motif Atlas
- Homologous match to IL_8P9A_348
- Geometric discrepancy: 0.1497
- The information below is about IL_8P9A_348
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9QIW|1|L5|A|4681
9QIW|1|L5|U|4682
9QIW|1|L5|U|4683
9QIW|1|L5|A|4684
9QIW|1|L5|U|4685
*
9QIW|1|L5|A|4705
9QIW|1|L5|G|4706
9QIW|1|L5|A|4707
9QIW|1|L5|A|4708
9QIW|1|L5|U|4709
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CC
- Guanine nucleotide-binding protein-like 3
- Chain CE
- Protein LLP homolog
- Chain CH
- Ribosome biogenesis protein NSA2 homolog
- Chain LH
- 60S ribosomal protein L9
- Chain LO
- 60S ribosomal protein L13a
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