IL_9QQA_018
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_018 not in the Motif Atlas
- Geometric match to IL_8CRE_409
- Geometric discrepancy: 0.2089
- The information below is about IL_8CRE_409
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01372.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9QQA|1|A2|U|367
9QQA|1|A2|U|368
9QQA|1|A2|U|369
9QQA|1|A2|C|370
9QQA|1|A2|G|371
9QQA|1|A2|A|372
*
9QQA|1|A2|U|394
9QQA|1|A2|G|395
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ah
- 40S ribosomal protein S8
- Chain Ak
- Small ribosomal subunit protein uS17
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BR
- Ribosomal protein L19
Coloring options: