IL_9QQA_047
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GCUAG*CUUGGACC
- Length
- 13 nucleotides
- Bulged bases
- 9QQA|1|A2|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_047 not in the Motif Atlas
- Geometric match to IL_6UFM_001
- Geometric discrepancy: 0.1757
- The information below is about IL_6UFM_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.1
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
9QQA|1|A2|G|953
9QQA|1|A2|C|954
9QQA|1|A2|U|955
9QQA|1|A2|A|956
9QQA|1|A2|G|957
*
9QQA|1|A2|C|968
9QQA|1|A2|U|969
9QQA|1|A2|U|970
9QQA|1|A2|G|971
9QQA|1|A2|G|972
9QQA|1|A2|A|973
9QQA|1|A2|C|974
9QQA|1|A2|C|975
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Aa
- 40S ribosomal protein S3a
- Chain An
- Small ribosomal subunit protein uS11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: