IL_9QQA_135

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQA_135 not in the Motif Atlas

Geometric match to IL_9D5J_002

Geometric discrepancy: 0.1043

The information below is about IL_9D5J_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

9QQA|1|B5|G|1007
9QQA|1|B5|C|1008
9QQA|1|B5|G|1009
*
9QQA|1|B5|C|1093
9QQA|1|B5|A|1094
9QQA|1|B5|C|1095

Current chains

Chain B5

28S rRNA

Nearby chains