IL_9QQA_165

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCC*GAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQA_165 not in the Motif Atlas

Geometric match to IL_7MLW_001

Geometric discrepancy: 0.1477

The information below is about IL_7MLW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

9QQA|1|B5|G|1700
9QQA|1|B5|C|1701
9QQA|1|B5|C|1702
*
9QQA|1|B5|G|1708
9QQA|1|B5|A|1709
9QQA|1|B5|U|1710

Current chains

Chain B5

28S rRNA

Nearby chains