IL_9QQA_180
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 9QQA|1|B5|G|2186
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_180 not in the Motif Atlas
- Geometric match to IL_8CRE_061
- Geometric discrepancy: 0.104
- The information below is about IL_8CRE_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
9QQA|1|B5|C|2133
9QQA|1|B5|G|2134
9QQA|1|B5|C|2135
*
9QQA|1|B5|G|2185
9QQA|1|B5|G|2186
9QQA|1|B5|U|2187
9QQA|1|B5|G|2188
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- Large ribosomal subunit protein uL4
- Chain Ba
- 60S ribosomal protein L27a
- Chain Be
- Ribosomal protein L32
- Chain Br
- [histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B
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