IL_9QQB_032

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GUU(A2M)AAA*UC

Length

9 nucleotides

Bulged bases

9QQB|1|A2|A2M|669

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_032 not in the Motif Atlas

Geometric match to IL_4LFB_022

Geometric discrepancy: 0.1693

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

9QQB|1|A2|G|666
9QQB|1|A2|U|667
9QQB|1|A2|U|668
9QQB|1|A2|A2M|669
9QQB|1|A2|A|670
9QQB|1|A2|A|671
9QQB|1|A2|A|672
*
9QQB|1|A2|U|1162
9QQB|1|A2|C|1163

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

eS26

Chain Aw

40S ribosomal protein S23