IL_9QQB_050
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_050 not in the Motif Atlas
- Geometric match to IL_8CRE_438
- Geometric discrepancy: 0.0696
- The information below is about IL_8CRE_438
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
9QQB|1|A2|C|1048
9QQB|1|A2|G|1049
9QQB|1|A2|A|1050
9QQB|1|A2|A|1051
9QQB|1|A2|G|1052
*
9QQB|1|A2|C|1068
9QQB|1|A2|G|1069
9QQB|1|A2|U|1070
9QQB|1|A2|A|1071
9QQB|1|A2|G|1072
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- eS26
- Chain An
- Small ribosomal subunit protein uS11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BA
- Large ribosomal subunit protein uL2
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