IL_9QQB_058
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CC(PSU)*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_058 not in the Motif Atlas
- Geometric match to IL_8P9A_432
- Geometric discrepancy: 0.1433
- The information below is about IL_8P9A_432
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
9QQB|1|A2|C|1231
9QQB|1|A2|C|1232
9QQB|1|A2|PSU|1233
*
9QQB|1|A2|G|1527
9QQB|1|A2|C|1528
9QQB|1|A2|G|1529
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AT
- Transfer RNA; tRNA
- Chain Ao
- Small ribosomal subunit protein uS19
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain Ar
- Small ribosomal subunit protein uS13
- Chain As
- 40S ribosomal protein S19
- Chain At
- Small ribosomal subunit protein uS10
- Chain Ay
- Small ribosomal subunit protein eS25
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