IL_9QQB_085
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9QQB|1|A2|A|1826
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_085 not in the Motif Atlas
- Geometric match to IL_8CRE_401
- Geometric discrepancy: 0.3082
- The information below is about IL_8CRE_401
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9QQB|1|A2|C|1709
9QQB|1|A2|G|1710
9QQB|1|A2|C|1711
9QQB|1|A2|U|1712
*
9QQB|1|A2|A|1823
9QQB|1|A2|A|1824
9QQB|1|A2|A|1825
9QQB|1|A2|A|1826
9QQB|1|A2|G|1827
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AD
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
- Chain Aw
- 40S ribosomal protein S23
- Chain Az
- Small ribosomal subunit protein eS32
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
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