IL_9QQB_100
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CUCAGUAA*UGAACAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_100 not in the Motif Atlas
- Geometric match to IL_1JBR_001
- Geometric discrepancy: 0.1427
- The information below is about IL_1JBR_001
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
9QQB|1|B5|C|81
9QQB|1|B5|U|82
9QQB|1|B5|C|83
9QQB|1|B5|A|84
9QQB|1|B5|G|85
9QQB|1|B5|U|86
9QQB|1|B5|A|87
9QQB|1|B5|A|88
*
9QQB|1|B5|U|96
9QQB|1|B5|G|97
9QQB|1|B5|A|98
9QQB|1|B5|A|99
9QQB|1|B5|C|100
9QQB|1|B5|A|101
9QQB|1|B5|G|102
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BL
- Large ribosomal subunit protein eL13
- Chain BN
- Ribosomal protein L15
- Chain BQ
- eL18
- Chain Ba
- 60S ribosomal protein L27a
Coloring options: