IL_9QQB_145

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GGAUC*GCGCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_145 not in the Motif Atlas

Geometric match to IL_1M5K_001

Geometric discrepancy: 0.3764

The information below is about IL_1M5K_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80926.1

Basepair signature

cWW-cWW-tSH-tHS-L-cWW

Number of instances in this motif group

7

Unit IDs

9QQB|1|B5|G|1380
9QQB|1|B5|G|1381
9QQB|1|B5|A|1382
9QQB|1|B5|U|1383
9QQB|1|B5|C|1384
*
9QQB|1|B5|G|1410
9QQB|1|B5|C|1411
9QQB|1|B5|G|1412
9QQB|1|B5|C|1413
9QQB|1|B5|A|1414
9QQB|1|B5|C|1415

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BQ

eL18

Chain Bb

60S ribosomal protein L29