IL_9QQB_184
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CCUUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 9QQB|1|B5|U|2148
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_184 not in the Motif Atlas
- Geometric match to IL_5J7L_288
- Geometric discrepancy: 0.1311
- The information below is about IL_5J7L_288
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.9
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 27
Unit IDs
9QQB|1|B5|C|2145
9QQB|1|B5|C|2146
9QQB|1|B5|U|2147
9QQB|1|B5|U|2148
9QQB|1|B5|G|2149
9QQB|1|B5|A|2150
9QQB|1|B5|A|2151
9QQB|1|B5|G|2152
*
9QQB|1|B5|U|2172
9QQB|1|B5|G|2173
9QQB|1|B5|G|2174
9QQB|1|B5|A|2175
9QQB|1|B5|G|2176
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- Large ribosomal subunit protein uL4
- Chain BY
- Ribosomal protein L26
- Chain Be
- Ribosomal protein L32
- Chain XA
- N-alpha-acetyltransferase 15, NatA auxiliary subunit
Coloring options: