IL_9QQB_231
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- U(PSU)GA*(PSU)ACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_231 not in the Motif Atlas
- Geometric match to IL_8CRE_440
- Geometric discrepancy: 0.197
- The information below is about IL_8CRE_440
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
9QQB|1|B5|U|4041
9QQB|1|B5|PSU|4042
9QQB|1|B5|G|4043
9QQB|1|B5|A|4044
*
9QQB|1|B5|PSU|4058
9QQB|1|B5|A|4059
9QQB|1|B5|C|4060
9QQB|1|B5|A|4061
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BD
- Large ribosomal subunit protein uL18
- Chain BQ
- eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Bb
- 60S ribosomal protein L29
- Chain Bo
- Large ribosomal subunit protein eL42
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