IL_9QQL_178
3D structure
- PDB id
- 9QQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPS15 P131 Mutant Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- GUUAGUAC*GGAAUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQL_178 not in the Motif Atlas
- Geometric match to IL_8QYX_169
- Geometric discrepancy: 0.067
- The information below is about IL_8QYX_169
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62879.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9QQL|1|B2|G|71
9QQL|1|B2|U|72
9QQL|1|B2|U|73
9QQL|1|B2|A|74
9QQL|1|B2|G|75
9QQL|1|B2|U|76
9QQL|1|B2|A|77
9QQL|1|B2|C|78
*
9QQL|1|B2|G|98
9QQL|1|B2|G|99
9QQL|1|B2|A|100
9QQL|1|B2|A|101
9QQL|1|B2|U|102
9QQL|1|B2|A|103
9QQL|1|B2|C|104
Current chains
- Chain B2
- 5S ribosomal RNA
Nearby chains
- Chain A1
- Large ribosomal subunit protein uL30
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain D1
- Large ribosomal subunit protein uL16
- Chain G2
- Large ribosomal subunit protein uL18
- Chain M2
- Large ribosomal subunit protein eL20
- Chain N2
- Large ribosomal subunit protein eL21
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