IL_9R3A_022
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9R3A|1|A|A|506, 9R3A|1|A|U|508, 9R3A|1|A|A|509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R3A_022 not in the Motif Atlas
- Homologous match to IL_6CZR_133
- Geometric discrepancy: 0.2401
- The information below is about IL_6CZR_133
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.3
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9R3A|1|A|G|489
9R3A|1|A|U|490
9R3A|1|A|G|491
9R3A|1|A|C|492
9R3A|1|A|C|493
9R3A|1|A|A|494
9R3A|1|A|G|495
*
9R3A|1|A|C|502
9R3A|1|A|G|503
9R3A|1|A|G|504
9R3A|1|A|U|505
9R3A|1|A|A|506
9R3A|1|A|A|507
9R3A|1|A|U|508
9R3A|1|A|A|509
9R3A|1|A|C|510
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain L
- Small ribosomal subunit protein uS12
- Chain Y
- Transfer RNA; tRNA
Coloring options: