IL_9R3A_040

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GCA*UUCCC

Length

8 nucleotides

Bulged bases

9R3A|1|A|C|908

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9R3A_040 not in the Motif Atlas

Homologous match to IL_6CZR_410

Geometric discrepancy: 0.2022

The information below is about IL_6CZR_410

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47078.2

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

9R3A|1|A|G|907
9R3A|1|A|C|908
9R3A|1|A|A|909
*
9R3A|1|A|U|1354
9R3A|1|A|U|1355
9R3A|1|A|C|1356
9R3A|1|A|C|1357
9R3A|1|A|C|1358

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain I

Small ribosomal subunit protein uS9

Chain Z

Transfer RNA; tRNA