IL_9R3A_051

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

9R3A|1|A|U|1133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9R3A_051 not in the Motif Atlas

Geometric match to IL_4LFB_050

Geometric discrepancy: 0.3723

The information below is about IL_4LFB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32376.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

9R3A|1|A|C|1132
9R3A|1|A|U|1133
9R3A|1|A|G|1134
9R3A|1|A|C|1135
*
9R3A|1|A|G|1149
9R3A|1|A|A|1150
9R3A|1|A|G|1151
9R3A|1|A|G|1152
9R3A|1|A|A|1153
9R3A|1|A|A|1154
9R3A|1|A|G|1155

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9

Chain V

Small ribosomal subunit protein uS2