IL_9R3A_059

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9R3A_059 not in the Motif Atlas

Geometric match to IL_4LFB_070

Geometric discrepancy: 0.3775

The information below is about IL_4LFB_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29925.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

9

Unit IDs

9R3A|1|A|C|1381
9R3A|1|A|A|1382
9R3A|1|A|C|1383
*
9R3A|1|A|G|1465
9R3A|1|A|A|1466
9R3A|1|A|A|1467
9R3A|1|A|G|1468

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

Small ribosomal subunit protein uS12

Chain Y

Transfer RNA; tRNA

Chain a

Large subunit ribosomal RNA; LSU rRNA