IL_9R3A_112

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

9R3A|1|a|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9R3A_112 not in the Motif Atlas

Homologous match to IL_7A0S_047

Geometric discrepancy: 0.2608

The information below is about IL_7A0S_047

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

9R3A|1|a|C|1319
9R3A|1|a|C|1320
9R3A|1|a|A|1321
9R3A|1|a|A|1322
9R3A|1|a|C|1323
*
9R3A|1|a|G|1331
9R3A|1|a|G|1332
9R3A|1|a|G|1333

Current chains

Chain a

23S rRNA

Nearby chains

Chain 6

Beta-Galactosidase Nascent Chain

Chain r

Large ribosomal subunit protein uL22