IL_9R3A_167

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

9R3A|1|a|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9R3A_167 not in the Motif Atlas

Homologous match to IL_7A0S_098

Geometric discrepancy: 0.1632

The information below is about IL_7A0S_098

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_91079.1

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9R3A|1|a|G|2737
9R3A|1|a|A|2738
9R3A|1|a|U|2739
9R3A|1|a|A|2740
9R3A|1|a|A|2741
9R3A|1|a|G|2742
*
9R3A|1|a|C|2762
9R3A|1|a|G|2763
9R3A|1|a|A|2764
9R3A|1|a|A|2765
9R3A|1|a|A|2766
9R3A|1|a|C|2767

Current chains

Chain a

23S rRNA

Nearby chains

Chain 3

Large ribosomal subunit protein bL36A

Chain g

Large ribosomal subunit protein uL6

Chain i

Large ribosomal subunit protein uL13