IL_9R9O_108

3D structure

PDB id

9R9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGUAC*GGAACAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9O|1|C1|C|3018
9R9O|1|C1|U|3019
9R9O|1|C1|U|3020
9R9O|1|C1|A|3021
9R9O|1|C1|G|3022
9R9O|1|C1|U|3023
9R9O|1|C1|A|3024
9R9O|1|C1|C|3025
*
9R9O|1|C1|G|3030
9R9O|1|C1|G|3031
9R9O|1|C1|A|3032
9R9O|1|C1|A|3033
9R9O|1|C1|C|3034
9R9O|1|C1|A|3035
9R9O|1|C1|G|3036

Current chains

Chain C1

25S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LH

60S ribosomal protein L9-A

Chain LV

60S ribosomal protein L23-A