IL_9R9O_173

3D structure

PDB id

9R9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAU*AGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9O|1|C2|G|885
9R9O|1|C2|U|886
9R9O|1|C2|A|887
9R9O|1|C2|U|888
*
9R9O|1|C2|A|924
9R9O|1|C2|G|925
9R9O|1|C2|A|926
9R9O|1|C2|C|927

Current chains

Chain C2

18S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L2-A

Chain SB

40S ribosomal protein S1-A

Chain SO

40S ribosomal protein S14-A

Chain Sa

Small ribosomal subunit protein eS26A