IL_9R9P_210

3D structure

PDB id

9R9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

9R9P|1|C2|A|1756

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9P|1|C2|C|1644
9R9P|1|C2|G|1645
9R9P|1|C2|C|1646
9R9P|1|C2|U|1647
*
9R9P|1|C2|A|1753
9R9P|1|C2|A|1754
9R9P|1|C2|A|1755
9R9P|1|C2|A|1756
9R9P|1|C2|G|1757

Current chains

Chain C2

RNA (1642-MER)

Nearby chains

Chain C1

Large subunit ribosomal RNA; LSU rRNA

Chain Ln

Large ribosomal subunit protein eL41B

Chain SX

40S ribosomal protein S23-A

Chain Se

40S ribosomal protein S30-A