IL_9RG7_242

3D structure

PDB id

9RG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro reconstituted NAA40-NAC bound 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

9RG7|1|S2|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RG7|1|S2|G|1281
9RG7|1|S2|A|1282
9RG7|1|S2|C|1283
9RG7|1|S2|A|1284
9RG7|1|S2|G|1285
9RG7|1|S2|G|1286
9RG7|1|S2|A|1287
9RG7|1|S2|U|1288
9RG7|1|S2|U|1289
9RG7|1|S2|G|1290
*
9RG7|1|S2|C|1309
9RG7|1|S2|U|1310
9RG7|1|S2|C|1311
9RG7|1|S2|G|1312
9RG7|1|S2|A|1313
9RG7|1|S2|U|1314
9RG7|1|S2|U|1315
9RG7|1|S2|C|1316

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SK

40S ribosomal protein S10

Chain SM

40S ribosomal protein S12

Chain Sd

40S ribosomal protein S29

Chain Sf

Ubiquitin