IL_9RHU_006
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RHU_006 not in the Motif Atlas
- Homologous match to IL_9PN5_147
- Geometric discrepancy: 0.0814
- The information below is about IL_9PN5_147
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.9
- Basepair signature
- cWW-cWH-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9RHU|1|A1|U|57
9RHU|1|A1|C|58
9RHU|1|A1|U|59
9RHU|1|A1|A|60
9RHU|1|A1|A|61
9RHU|1|A1|G|62
*
9RHU|1|A1|C|86
9RHU|1|A1|U|87
9RHU|1|A1|G|88
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain P1
- 40S ribosomal protein S4
- Chain R1
- 40S ribosomal protein S6
- Chain j1
- 40S ribosomal protein S24
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