IL_9RHU_010

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

(OMU)CC(PSU)U(OMU)*AUUCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|OMU|116
9RHU|1|A1|C|117
9RHU|1|A1|C|118
9RHU|1|A1|PSU|119
9RHU|1|A1|U|120
9RHU|1|A1|OMU|121
*
9RHU|1|A1|A|344
9RHU|1|A1|U|345
9RHU|1|A1|U|346
9RHU|1|A1|C|347
9RHU|1|A1|G|348

Current chains

Chain A1

18S rRNA

Nearby chains

Chain P1

40S ribosomal protein S4

Chain T1

40S ribosomal protein S8