IL_9RHU_011

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9RHU|1|A1|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|G|145
9RHU|1|A1|G|146
9RHU|1|A1|A|147
9RHU|1|A1|U|148
9RHU|1|A1|A|149
9RHU|1|A1|A|150
9RHU|1|A1|C|151
*
9RHU|1|A1|G|167
9RHU|1|A1|C|168
9RHU|1|A1|U|169
9RHU|1|A1|A|170
9RHU|1|A1|A|171
9RHU|1|A1|OMU|172
9RHU|1|A1|A|173
9RHU|1|A1|OMC|174

Current chains

Chain A1

18S rRNA

Nearby chains

Chain R1

40S ribosomal protein S6

Chain S2

Ribosomal protein L24

Chain j1

40S ribosomal protein S24