IL_9RHU_032
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GUGCCAG*CGG(OMU)AAUUC
- Length
- 16 nucleotides
- Bulged bases
- 9RHU|1|A1|A|629, 9RHU|1|A1|U|631, 9RHU|1|A1|U|632
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|G|612
9RHU|1|A1|U|613
9RHU|1|A1|G|614
9RHU|1|A1|C|615
9RHU|1|A1|C|616
9RHU|1|A1|A|617
9RHU|1|A1|G|618
*
9RHU|1|A1|C|625
9RHU|1|A1|G|626
9RHU|1|A1|G|627
9RHU|1|A1|OMU|628
9RHU|1|A1|A|629
9RHU|1|A1|A|630
9RHU|1|A1|U|631
9RHU|1|A1|U|632
9RHU|1|A1|C|633
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain E1
- 40S ribosomal protein eS30
- Chain I1
- mRNA containing F2A sequence
- Chain O1
- Small ribosomal subunit protein uS3
- Chain i1
- 40S ribosomal protein S23
- Chain p2
- Eukaryotic peptide chain release factor subunit 1
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