IL_9RHU_051

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

9RHU|1|A1|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|G|953
9RHU|1|A1|C|954
9RHU|1|A1|U|955
9RHU|1|A1|A|956
9RHU|1|A1|G|957
*
9RHU|1|A1|C|968
9RHU|1|A1|U|969
9RHU|1|A1|U|970
9RHU|1|A1|G|971
9RHU|1|A1|G|972
9RHU|1|A1|A|973
9RHU|1|A1|C|974
9RHU|1|A1|C|975

Current chains

Chain A1

18S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain M1

40S ribosomal protein S3a

Chain Z1

Small ribosomal subunit protein uS11