IL_9RHU_058

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGAGUA(PSU)G*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|G|1169
9RHU|1|A1|G|1170
9RHU|1|A1|A|1171
9RHU|1|A1|G|1172
9RHU|1|A1|U|1173
9RHU|1|A1|A|1174
9RHU|1|A1|PSU|1175
9RHU|1|A1|G|1176
*
9RHU|1|A1|U|1187
9RHU|1|A1|G|1188
9RHU|1|A1|A|1189
9RHU|1|A1|A|1190
9RHU|1|A1|A|1191
9RHU|1|A1|C|1192

Current chains

Chain A1

18S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain i1

40S ribosomal protein S23

Chain l1

Small ribosomal subunit protein eS32