IL_9RHU_061

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

ACCA*UCCCU

Length

9 nucleotides

Bulged bases

9RHU|1|A1|C|1216, 9RHU|1|A1|C|1217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|A|1215
9RHU|1|A1|C|1216
9RHU|1|A1|C|1217
9RHU|1|A1|A|1218
*
9RHU|1|A1|U|1682
9RHU|1|A1|C|1683
9RHU|1|A1|C|1684
9RHU|1|A1|C|1685
9RHU|1|A1|U|1686

Current chains

Chain A1

18S rRNA

Nearby chains

Chain C1

Small ribosomal subunit protein eS28

Chain J1

Transfer RNA; tRNA

Chain K1

Transfer RNA; tRNA

Chain Q1

Small ribosomal subunit protein uS7

Chain b1

Small ribosomal subunit protein uS9