IL_9RHU_076

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CAUGC*(OMG)AGG

Length

9 nucleotides

Bulged bases

9RHU|1|A1|U|1398

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|C|1396
9RHU|1|A1|A|1397
9RHU|1|A1|U|1398
9RHU|1|A1|G|1399
9RHU|1|A1|C|1400
*
9RHU|1|A1|OMG|1448
9RHU|1|A1|A|1449
9RHU|1|A1|G|1450
9RHU|1|A1|G|1451

Current chains

Chain A1

18S rRNA

Nearby chains

Chain G1

Small ribosomal subunit protein RACK1

Chain b1

Small ribosomal subunit protein uS9

Chain c1

Small ribosomal subunit protein eS17

Chain f1

Small ribosomal subunit protein uS10