IL_9RHU_086

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

9RHU|1|A1|C|1702, 9RHU|1|A1|A|1836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|C|1701
9RHU|1|A1|C|1702
9RHU|1|A1|G|1703
*
9RHU|1|A1|C|1834
9RHU|1|A1|A|1835
9RHU|1|A1|A|1836
9RHU|1|A1|G|1837

Current chains

Chain A1

18S rRNA

Nearby chains

Chain F1

eS26

Chain I1

mRNA containing F2A sequence

Chain K1

Transfer RNA; tRNA

Chain p2

Eukaryotic peptide chain release factor subunit 1