IL_9RHU_169

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGGUAA*(PSU)AAAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|1671
9RHU|1|A3|G|1672
9RHU|1|A3|G|1673
9RHU|1|A3|U|1674
9RHU|1|A3|A|1675
9RHU|1|A3|A|1676
*
9RHU|1|A3|PSU|1731
9RHU|1|A3|A|1732
9RHU|1|A3|A|1733
9RHU|1|A3|A|1734
9RHU|1|A3|U|1735
9RHU|1|A3|G|1736

Current chains

Chain A3

28S rRNA

Nearby chains

Chain B2

60S ribosomal protein L7

Chain B3

5S ribosomal RNA; 5S rRNA

Chain E2

60S ribosomal protein L10

Chain G3

Large ribosomal subunit protein uL18

Chain P2

60S ribosomal protein L21