IL_9RHU_232

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|G|3702
9RHU|1|A3|G|3703
9RHU|1|A3|A|3704
9RHU|1|A3|G|3705
*
9RHU|1|A3|C|3766
9RHU|1|A3|G|3767
9RHU|1|A3|C|3768
9RHU|1|A3|C|3769
9RHU|1|A3|G|3770
9RHU|1|A3|G|3771
9RHU|1|A3|U|3772
9RHU|1|A3|G|3773
9RHU|1|A3|A|3774
9RHU|1|A3|A|3775
9RHU|1|A3|A|3776
9RHU|1|A3|U|3777
9RHU|1|A3|A|3778
9RHU|1|A3|C|3779

Current chains

Chain A3

28S rRNA

Nearby chains

Chain J1

Transfer RNA; tRNA

Chain o2

Ribosomal protein uL1