IL_9RHU_258

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUCAGUAC*GGAACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|4342
9RHU|1|A3|U|4343
9RHU|1|A3|C|4344
9RHU|1|A3|A|4345
9RHU|1|A3|G|4346
9RHU|1|A3|U|4347
9RHU|1|A3|A|4348
9RHU|1|A3|C|4349
*
9RHU|1|A3|G|4354
9RHU|1|A3|G|4355
9RHU|1|A3|A|4356
9RHU|1|A3|A|4357
9RHU|1|A3|C|4358
9RHU|1|A3|C|4359
9RHU|1|A3|G|4360

Current chains

Chain A3

28S rRNA

Nearby chains

Chain D2

60S ribosomal protein L9

Chain E3

Ribosomal protein L3

Chain R2

Ribosomal protein L23

Chain i2

Ubiquitin-ribosomal protein eL40 fusion protein

Chain q2

ATP binding cassette subfamily E member 1