IL_9RPV_037

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9RPV|1|L5|G|748, 9RPV|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|745
9RPV|1|L5|A|746
9RPV|1|L5|A|747
9RPV|1|L5|G|748
9RPV|1|L5|G|749
9RPV|1|L5|U|750
9RPV|1|L5|G|751
9RPV|1|L5|G|752
*
9RPV|1|L5|U|911
9RPV|1|L5|G|912
9RPV|1|L5|U|913
9RPV|1|L5|U|914
9RPV|1|L5|A|915
9RPV|1|L5|C|916
9RPV|1|L5|A|917
9RPV|1|L5|G|918
9RPV|1|L5|C|919

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a