IL_9RPV_523

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

9RPV|1|S3|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|C|1708
9RPV|1|S3|G|1709
9RPV|1|S3|C|1710
9RPV|1|S3|U|1711
*
9RPV|1|S3|A|1822
9RPV|1|S3|A|1823
9RPV|1|S3|A|1824
9RPV|1|S3|A|1825
9RPV|1|S3|G|1826

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain A5

mRNA of the stalled 80S

Chain M5

Large subunit ribosomal RNA; LSU rRNA

Chain Mn

60S ribosomal protein L41

Chain RX

40S ribosomal protein S23