IL_9RPV_529
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CCU*ACG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_529 not in the Motif Atlas
- Geometric match to IL_8GLP_283
- Geometric discrepancy: 0.0465
- The information below is about IL_8GLP_283
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.7
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 240
Unit IDs
9RPV|1|S3|C|1739
9RPV|1|S3|C|1740
9RPV|1|S3|U|1741
*
9RPV|1|S3|A|1793
9RPV|1|S3|C|1794
9RPV|1|S3|G|1795
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain M5
- Large subunit ribosomal RNA; LSU rRNA
- Chain MW
- 60S ribosomal protein L24
- Chain RG
- 40S ribosomal protein S6
- Chain RI
- 40S ribosomal protein S8
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