IL_9RTU_172

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

9RTU|1|a|C|1400, 9RTU|1|a|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTU_172 not in the Motif Atlas

Geometric match to IL_8GLP_274

Geometric discrepancy: 0.0578

The information below is about IL_8GLP_274

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18228.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

9RTU|1|a|C|1399
9RTU|1|a|C|1400
9RTU|1|a|G|1401
*
9RTU|1|a|C|1501
9RTU|1|a|A|1502
9RTU|1|a|A|1503
9RTU|1|a|G|1504

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain v

Transfer RNA; tRNA

Chain z

mRNA