IL_9RTV_026
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGGUAG*CGAAUAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RTV_026 not in the Motif Atlas
- Geometric match to IL_8B0X_090
- Geometric discrepancy: 0.0735
- The information below is about IL_8B0X_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94128.1
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9RTV|1|A|G|856
9RTV|1|A|G|857
9RTV|1|A|G|858
9RTV|1|A|G|859
9RTV|1|A|U|860
9RTV|1|A|A|861
9RTV|1|A|G|862
*
9RTV|1|A|C|915
9RTV|1|A|G|916
9RTV|1|A|A|917
9RTV|1|A|A|918
9RTV|1|A|U|919
9RTV|1|A|A|920
9RTV|1|A|C|921
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
- Chain W
- Large ribosomal subunit protein bL27
- Chain Z
- 50S ribosomal protein L30
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