IL_9RU7_164

3D structure

PDB id

9RU7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9RU7|1|S2|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU7|1|S2|G|145
9RU7|1|S2|G|146
9RU7|1|S2|A|147
9RU7|1|S2|U|148
9RU7|1|S2|A|149
9RU7|1|S2|A|150
9RU7|1|S2|C|151
*
9RU7|1|S2|G|167
9RU7|1|S2|C|168
9RU7|1|S2|U|169
9RU7|1|S2|A|170
9RU7|1|S2|A|171
9RU7|1|S2|U|172
9RU7|1|S2|A|173
9RU7|1|S2|C|174

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24