IL_9RU7_176
3D structure
- PDB id
- 9RU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCCA*UCCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU7_176 not in the Motif Atlas
- Geometric match to IL_8GLP_220
- Geometric discrepancy: 0.1655
- The information below is about IL_8GLP_220
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 43
Unit IDs
9RU7|1|S2|U|566
9RU7|1|S2|C|567
9RU7|1|S2|C|568
9RU7|1|S2|A|569
*
9RU7|1|S2|U|581
9RU7|1|S2|C|582
9RU7|1|S2|C|583
9RU7|1|S2|G|584
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SJ
- 40S ribosomal protein S9
- Chain SY
- 40S ribosomal protein S24
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